Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-494 in CA Breast Richardson Cluster 15 Table contains all genes in the CA Breast Richardson cluster number 15. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-494 144124 OR10A5 olfactory receptor, family 10, subfamily A, member 5 [Source:HGNC Symbol;Acc:15131] zzz999 8809 IL18R1 interleukin 18 receptor 1 [Source:HGNC Symbol;Acc:5988] T 23239 PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:20610] zzz999 83895 KRTAP1-5 keratin associated protein 1-5 [Source:HGNC Symbol;Acc:16777] T 4548 MTR 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:7468] T 23215 PRRC2C proline-rich coiled-coil 2C [Source:HGNC Symbol;Acc:24903] zzz999 339416 ANKRD45 ankyrin repeat domain 45 [Source:HGNC Symbol;Acc:24786] zzz999 3178 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:5031] zzz999 6712 SPTBN2 spectrin, beta, non-erythrocytic 2 [Source:HGNC Symbol;Acc:11276] zzz999 1418 CRYGA crystallin, gamma A [Source:HGNC Symbol;Acc:2408] zzz999 55746 NUP133 nucleoporin 133kDa [Source:HGNC Symbol;Acc:18016] T 4300 MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 [Source:HGNC Symbol;Acc:7136] zzz999 56128 PCDHB8 protocadherin beta 8 [Source:HGNC Symbol;Acc:8693] zzz999 2589 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) [Source:HGNC Symbol;Acc:4123] T 26692 OR2W1 olfactory receptor, family 2, subfamily W, member 1 [Source:HGNC Symbol;Acc:8281] zzz999 64922 LRRC19 leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:23379] T 10794 ZNF460 zinc finger protein 460 [Source:HGNC Symbol;Acc:21628] T 59353 TMEM35 transmembrane protein 35 [Source:HGNC Symbol;Acc:25864] T 158401 C9orf84 chromosome 9 open reading frame 84 [Source:HGNC Symbol;Acc:26535] zzz999 57536 KIAA1328 KIAA1328 [Source:HGNC Symbol;Acc:29248] zzz999 1717 DHCR7 7-dehydrocholesterol reductase [Source:HGNC Symbol;Acc:2860] zzz999 51725 FBXO40 F-box protein 40 [Source:HGNC Symbol;Acc:29816] zzz999 3848 KRT1 keratin 1 [Source:HGNC Symbol;Acc:6412] T 260434 PYDC1 PYD (pyrin domain) containing 1 [Source:HGNC Symbol;Acc:30261] zzz999 9742 IFT140 intraflagellar transport 140 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:29077] zzz999 115560 ZNF501 zinc finger protein 501 [Source:HGNC Symbol;Acc:23717] zzz999 1010 CDH12 cadherin 12, type 2 (N-cadherin 2) [Source:HGNC Symbol;Acc:1751] zzz999 1539 CYLC2 cylicin, basic protein of sperm head cytoskeleton 2 [Source:HGNC Symbol;Acc:2583] zzz999 89822 KCNK17 potassium channel, subfamily K, member 17 [Source:HGNC Symbol;Acc:14465] zzz999 126375 ZNF792 zinc finger protein 792 [Source:HGNC Symbol;Acc:24751] zzz999 767 CA8 carbonic anhydrase VIII [Source:HGNC Symbol;Acc:1382] zzz999 340419 RSPO2 R-spondin 2 homolog (Xenopus laevis) [Source:HGNC Symbol;Acc:28583] T 3452 IFNA21 interferon, alpha 21 [Source:HGNC Symbol;Acc:5424] T 388394 RPRML reprimo-like [Source:HGNC Symbol;Acc:32422] zzz999 3446 IFNA10 interferon, alpha 10 [Source:HGNC Symbol;Acc:5418] zzz999 84449 ZNF333 zinc finger protein 333 [Source:HGNC Symbol;Acc:15624] T 55667 DENND4C DENN/MADD domain containing 4C [Source:HGNC Symbol;Acc:26079] zzz999 11157 LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17017] zzz999 51265 CDKL3 cyclin-dependent kinase-like 3 [Source:HGNC Symbol;Acc:15483] zzz999 9955 HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 [Source:HGNC Symbol;Acc:5196] T 3886 KRT35 keratin 35 [Source:HGNC Symbol;Acc:6453] zzz999 55819 RNF130 ring finger protein 130 [Source:HGNC Symbol;Acc:18280] zzz999 84552 PARD6G par-6 partitioning defective 6 homolog gamma (C. elegans) [Source:HGNC Symbol;Acc:16076] T 65975 STK33 serine/threonine kinase 33 [Source:HGNC Symbol;Acc:14568] zzz999 2845 GPR22 G protein-coupled receptor 22 [Source:HGNC Symbol;Acc:4477] zzz999 25941 C18orf10 chromosome 18 open reading frame 10 [Source:HGNC Symbol;Acc:24561] zzz999 55137 FIGN fidgetin [Source:HGNC Symbol;Acc:13285] zzz999 55022 PID1 phosphotyrosine interaction domain containing 1 [Source:HGNC Symbol;Acc:26084] zzz999 57717 PCDHB16 protocadherin beta 16 [Source:HGNC Symbol;Acc:14546] zzz999 80309 SPHKAP SPHK1 interactor, AKAP domain containing [Source:HGNC Symbol;Acc:30619] T 50511 SYCP3 synaptonemal complex protein 3 [Source:HGNC Symbol;Acc:18130] T 9310 ZNF235 zinc finger protein 235 [Source:HGNC Symbol;Acc:12866] zzz999 63874 ABHD4 abhydrolase domain containing 4 [Source:HGNC Symbol;Acc:20154] zzz999 388566 ZNF470 zinc finger protein 470 [Source:HGNC Symbol;Acc:22220] T 79863 RBFA ribosome binding factor A (putative) [Source:HGNC Symbol;Acc:26120] zzz999 54808 DYM dymeclin [Source:HGNC Symbol;Acc:21317] zzz999 3950 LECT2 leukocyte cell-derived chemotaxin 2 [Source:HGNC Symbol;Acc:6550] zzz999 5275 SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13 [Source:HGNC Symbol;Acc:8944] T 3449 IFNA16 interferon, alpha 16 [Source:HGNC Symbol;Acc:5421] zzz999 389058 SP5 Sp5 transcription factor [Source:HGNC Symbol;Acc:14529] zzz999 10726 NUDC nuclear distribution gene C homolog (A. nidulans) [Source:HGNC Symbol;Acc:8045] zzz999 375287 RBM43 RNA binding motif protein 43 [Source:HGNC Symbol;Acc:24790] T 25963 TMEM87A transmembrane protein 87A [Source:HGNC Symbol;Acc:24522] P T 29991 OBP2A odorant binding protein 2A [Source:HGNC Symbol;Acc:23380] zzz999 57579 FAM135A family with sequence similarity 135, member A [Source:HGNC Symbol;Acc:21084] P T 6422 SFRP1 secreted frizzled-related protein 1 [Source:HGNC Symbol;Acc:10776] T 80206 FHOD3 formin homology 2 domain containing 3 [Source:HGNC Symbol;Acc:26178] P T 3622 ING2 inhibitor of growth family, member 2 [Source:HGNC Symbol;Acc:6063] zzz999 4677 NARS asparaginyl-tRNA synthetase [Source:HGNC Symbol;Acc:7643] T 84939 MUM1 melanoma associated antigen (mutated) 1 [Source:HGNC Symbol;Acc:29641] T 85280 KRTAP9-4 keratin associated protein 9-4 [Source:HGNC Symbol;Acc:18902] T 9108 MTMR7 myotubularin related protein 7 [Source:HGNC Symbol;Acc:7454] zzz999 9811 CTIF CBP80/20-dependent translation initiation factor [Source:HGNC Symbol;Acc:23925] T 4093 SMAD9 SMAD family member 9 [Source:HGNC Symbol;Acc:6774] zzz999 3441 IFNA4 interferon, alpha 4 [Source:HGNC Symbol;Acc:5425] zzz999 29090 C18orf55 chromosome 18 open reading frame 55 [Source:HGNC Symbol;Acc:25010] zzz999 9227 LRAT lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) [Source:HGNC Symbol;Acc:6685] T 55254 TMEM39A transmembrane protein 39A [Source:HGNC Symbol;Acc:25600] zzz999 83608 C18orf21 chromosome 18 open reading frame 21 [Source:HGNC Symbol;Acc:28802] zzz999 9049 AIP aryl hydrocarbon receptor interacting protein [Source:HGNC Symbol;Acc:358] zzz999 26098 C10orf137 chromosome 10 open reading frame 137 [Source:HGNC Symbol;Acc:24640] T 284307 ZIK1 zinc finger protein interacting with K protein 1 homolog (mouse) [Source:HGNC Symbol;Acc:33104] zzz999 2627 GATA6 GATA binding protein 6 [Source:HGNC Symbol;Acc:4174] zzz999 221302 ZUFSP zinc finger with UFM1-specific peptidase domain [Source:HGNC Symbol;Acc:21224] zzz999 4756 NEO1 neogenin 1 [Source:HGNC Symbol;Acc:7754] P T 2558 GABRA5 gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:HGNC Symbol;Acc:4079] P T 5775 PTPN4 protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) [Source:HGNC Symbol;Acc:9656] T 135138 PACRG PARK2 co-regulated [Source:HGNC Symbol;Acc:19152] zzz999 6139 RPL17 ribosomal protein L17 [Source:HGNC Symbol;Acc:10307] zzz999 91408 BTF3L4 basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] zzz999 9377 COX5A cytochrome c oxidase subunit Va [Source:HGNC Symbol;Acc:2267] zzz999 114821 SCAND3 SCAN domain containing 3 [Source:HGNC Symbol;Acc:13851] zzz999 8792 TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator [Source:HGNC Symbol;Acc:11908] zzz999 9245 GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type [Source:HGNC Symbol;Acc:4205] zzz999 8665 EIF3F eukaryotic translation initiation factor 3, subunit F [Source:HGNC Symbol;Acc:3275] zzz999 55345 C4orf21 chromosome 4 open reading frame 21 [Source:HGNC Symbol;Acc:25654] zzz999 3008 HIST1H1E histone cluster 1, H1e [Source:HGNC Symbol;Acc:4718] zzz999 10907 TXNL4A thioredoxin-like 4A [Source:HGNC Symbol;Acc:30551] zzz999 8715 NOL4 nucleolar protein 4 [Source:HGNC Symbol;Acc:7870] zzz999 689 BTF3 basic transcription factor 3 [Source:HGNC Symbol;Acc:1125] zzz999 91012 LASS5 LAG1 homolog, ceramide synthase 5 [Source:HGNC Symbol;Acc:23749] zzz999 149643 C1orf227 chromosome 1 open reading frame 227 [Source:HGNC Symbol;Acc:33709] zzz999 55088 C10orf118 chromosome 10 open reading frame 118 [Source:HGNC Symbol;Acc:24349] T 91975 ZNF300 zinc finger protein 300 [Source:HGNC Symbol;Acc:13091] zzz999 23242 COBL cordon-bleu homolog (mouse) [Source:HGNC Symbol;Acc:22199] T 22878 TRAPPC8 trafficking protein particle complex 8 [Source:HGNC Symbol;Acc:29169] T 3737 KCNA2 potassium voltage-gated channel, shaker-related subfamily, member 2 [Source:HGNC Symbol;Acc:6220] zzz999 3448 IFNA14 interferon, alpha 14 [Source:HGNC Symbol;Acc:5420] zzz999 5509 PPP1R3D protein phosphatase 1, regulatory (inhibitor) subunit 3D [Source:HGNC Symbol;Acc:9294] zzz999 10152 ABI2 abl-interactor 2 [Source:HGNC Symbol;Acc:24011] T 25842 ASF1A ASF1 anti-silencing function 1 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:20995] T 9525 VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:10895] T 153830 RNF145 ring finger protein 145 [Source:HGNC Symbol;Acc:20853] zzz999 285671 RNF180 ring finger protein 180 [Source:HGNC Symbol;Acc:27752] zzz999 25817 FAM19A5 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 [Source:HGNC Symbol;Acc:21592] zzz999 140775 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:17921] T 167410 LIX1 Lix1 homolog (chicken) [Source:HGNC Symbol;Acc:18581] T 84307 ZNF397 zinc finger protein 397 [Source:HGNC Symbol;Acc:18818] zzz999 10936 GPR75 G protein-coupled receptor 75 [Source:HGNC Symbol;Acc:4526] zzz999 6392 SDHD succinate dehydrogenase complex, subunit D, integral membrane protein [Source:HGNC Symbol;Acc:10683] zzz999 5970 RELA v-rel reticuloendotheliosis viral oncogene homolog A (avian) [Source:HGNC Symbol;Acc:9955] zzz999 8543 LMO4 LIM domain only 4 [Source:HGNC Symbol;Acc:6644] T 54926 UBE2R2 ubiquitin-conjugating enzyme E2R 2 [Source:HGNC Symbol;Acc:19907] zzz999 9889 ZBED4 zinc finger, BED-type containing 4 [Source:HGNC Symbol;Acc:20721] T 820 CAMP cathelicidin antimicrobial peptide [Source:HGNC Symbol;Acc:1472] zzz999 56851 C15orf24 chromosome 15 open reading frame 24 [Source:HGNC Symbol;Acc:24301] zzz999 92346 C1orf105 chromosome 1 open reading frame 105 [Source:HGNC Symbol;Acc:29591] zzz999 26298 EHF ets homologous factor [Source:HGNC Symbol;Acc:3246] zzz999 4051 CYP4F2 cytochrome P450, family 4, subfamily F, polypeptide 2 [Source:HGNC Symbol;Acc:2645] T 80823 BHLHB9 basic helix-loop-helix domain containing, class B, 9 [Source:HGNC Symbol;Acc:29353] T 1012 CDH13 cadherin 13, H-cadherin (heart) [Source:HGNC Symbol;Acc:1753] T 114801 TMEM200A transmembrane protein 200A [Source:HGNC Symbol;Acc:21075] zzz999 148808 MFSD4 major facilitator superfamily domain containing 4 [Source:HGNC Symbol;Acc:25433] T 23538 OR52A1 olfactory receptor, family 52, subfamily A, member 1 [Source:HGNC Symbol;Acc:8318] zzz999 4829 NMBR neuromedin B receptor [Source:HGNC Symbol;Acc:7843] zzz999 81796 SLCO5A1 solute carrier organic anion transporter family, member 5A1 [Source:HGNC Symbol;Acc:19046] T 55628 ZNF407 zinc finger protein 407 [Source:HGNC Symbol;Acc:19904] zzz999 134 ADORA1 adenosine A1 receptor [Source:HGNC Symbol;Acc:262] zzz999 152518 NFXL1 nuclear transcription factor, X-box binding-like 1 [Source:HGNC Symbol;Acc:18726] P T 4750 NEK1 NIMA (never in mitosis gene a)-related kinase 1 [Source:HGNC Symbol;Acc:7744] zzz999 7546 ZIC2 Zic family member 2 (odd-paired homolog, Drosophila) [Source:HGNC Symbol;Acc:12873] P T 54919 HEATR2 HEAT repeat containing 2 [Source:HGNC Symbol;Acc:26013] zzz999 9352 TXNL1 thioredoxin-like 1 [Source:HGNC Symbol;Acc:12436] P T 7576 ZNF28 zinc finger protein 28 [Source:HGNC Symbol;Acc:13073] T 84186 ZCCHC7 zinc finger, CCHC domain containing 7 [Source:HGNC Symbol;Acc:26209] T 81627 TRMT1L TRM1 tRNA methyltransferase 1-like [Source:HGNC Symbol;Acc:16782] zzz999 2742 GLRA2 glycine receptor, alpha 2 [Source:HGNC Symbol;Acc:4327] T 5902 RANBP1 RAN binding protein 1 [Source:HGNC Symbol;Acc:9847] zzz999 10251 SPRY3 sprouty homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:11271] T 10125 RASGRP1 RAS guanyl releasing protein 1 (calcium and DAG-regulated) [Source:HGNC Symbol;Acc:9878] T 10362 HMG20B high mobility group 20B [Source:HGNC Symbol;Acc:5002] zzz999 162681 C18orf54 chromosome 18 open reading frame 54 [Source:HGNC Symbol;Acc:13796] T 28962 OSTM1 osteopetrosis associated transmembrane protein 1 [Source:HGNC Symbol;Acc:21652] T 57724 EPG5 ectopic P-granules autophagy protein 5 homolog (C. elegans) [Source:HGNC Symbol;Acc:29331] T 54877 ZCCHC2 zinc finger, CCHC domain containing 2 [Source:HGNC Symbol;Acc:22916] T 131096 KCNH8 potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:HGNC Symbol;Acc:18864] zzz999 27439 CECR6 cat eye syndrome chromosome region, candidate 6 [Source:HGNC Symbol;Acc:1844] zzz999 55751 TMEM184C transmembrane protein 184C [Source:HGNC Symbol;Acc:25587] zzz999 221322 C6orf170 chromosome 6 open reading frame 170 [Source:HGNC Symbol;Acc:21485] zzz999 8353 HIST1H3J histone cluster 1, H3j [Source:HGNC Symbol;Acc:4774] zzz999 2915 GRM5 glutamate receptor, metabotropic 5 [Source:HGNC Symbol;Acc:4597] zzz999 152831 KLB klotho beta [Source:HGNC Symbol;Acc:15527] zzz999 50836 TAS2R8 taste receptor, type 2, member 8 [Source:HGNC Symbol;Acc:14915] zzz999 9479 MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1 [Source:HGNC Symbol;Acc:6882] zzz999 7572 ZNF24 zinc finger protein 24 [Source:HGNC Symbol;Acc:13032] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.